Our publication

2024

  1. Baseline amplicon sequencing data for the internal transcribed spacer 2 region in the green honey of Banggi Island, Sabah
  2. Molecular docking and dynamics simulation studies uncover the host-pathogen protein-protein interactions in Penaeus vannamei and Vibrio parahaemolyticus
  3. An ensemble docking-based virtual screening and molecular dynamics simulation of phytochemical compounds from Malaysian Kelulut Honey (KH) against SARS-CoV-2 target enzyme, human angiotensin-converting enzyme 2 (ACE-2)

2023

  1. Interaction of the nanobio-based reagent with sodium fluorescein and lipids via bioinformatics for forensic fingerprint visualisations
  2. In silico Study of Thiourea Derivatives as Potential Epidermal Growth Factor Receptor Inhibitors
  3. Metal uptake and tolerance in hyperaccumulator plants: Advancing phytomining strategies
  4. Homology modeling of human BAP1 and analysis of its binding properties through molecular docking and molecular dynamics simulation

2022

  1. P-glycoprotein: new insights into structure, physiological function, regulation and alterations in disease
  2. Molecular interactions of trichoderma β-1,4-glucosidase (ThBglT12) with mycelial cell wall components of phytopathogenic Macrophomina phaseolina
  3. Homology modeling of human BAP1 and analysis of its binding properties through molecular docking and molecular dynamics simulation
  4. Computational Studies of Potential Ebola Vp40 Inhibitors using Bioactive Compounds from Medicinal Plants Of Malaysia

2021

  1. Vaccines | Free Full-Text | HSV-1 ICP22 Is a Selective Viral Repressor of Cellular RNA Polymerase II-Mediated Transcription Elongation
  2. Molecular docking and molecular dynamics simulations of a mutant Acinetobacter haemolyticus alkaline-stable lipase against tributyrin
  3. Polyhydroxyalkanoates (PHA)-based responsive polymers
  4. Molecular docking and molecular dynamics simulations studies on β-glucosidase and xylanase Trichoderma asperellum to predict degradation order of cellulosic …
  5. Virtual Screening for Potential Inhibitors of Human Hexokinase II for the Development of Anti-Dengue Therapeutics

2020

  1. In Silico Structural and Functional Annotation of Nine Essential Hypothetical Proteins from Streptococcus pneumoniae
  2. Substrate docking and molecular dynamic simulation for prediction of fungal enzymes from Trichoderma species-assisted extraction of nanocellulose from oil palm …
  3. De novo transcriptome dataset of Stevia rebaudiana accession MS007
  4. Comparative modelling studies of fruit bromelain using molecular dynamics simulation.
  5. Orthologous Revelation between Elaeis guineensis, Arabidopsis thaliana and Solanum lycopersicum
  6. In-silico study of single-strand DNA aptamers against cortisol as a potential biomarker receptor in therapeutics and diagnostics
  7. The assessment of three dimensional modelling design for single strand DNA aptamers for computational chemistry application
  8. Biodegradation of 3-chloropropionic acid (3-CP) by Bacillus cereus WH2 and its in silico enzyme-substrate docking analysis

2019

  1. In silico screening of aptamers configuration against hepatitis B surface antigen

RUBIC is a research unit focusing on Bioinformatics and Computational biology techniques and integration of both experimental and theoretical studies, we also conduct and organize training, seminar, and meeting to share and disseminate knowledge transfer to the wider research community inside and outside IIUM. This will also become a platform to foster interactions and inter-department, inter-kulliyyah within IIUM as well as external research collaborations. This research group aims to emerge as a center for Bioinformatics and Computational Biology that involves scientific research breakthroughs in line with IIUM vision and mission according to the national key priority area.

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